Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs12775150 | chr10:63437766 | A/T | 7.18E-5 | 213 | 17.02 | 12.13 | 7.85 | KM Plot |
| KIRP | rs12775696 | chr10:70682901 | G/A | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs12776615 | chr10:63439368 | G/T | 0 | 214 | 18.02 | 6.2 | 3.38 | KM Plot |
| KIRP | rs12776685 | chr10:70713622 | C/T | 7.37E-9 | 214 | 15.2 | 16.97 | 10.6 | KM Plot |
| KIRP | rs12777213 | chr10:63462162 | G/A | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
| KIRP | rs12778685 | chr10:70737972 | T/C | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs12778737 | chr10:63434648 | A/T | 0 | 213 | 18 | 7.92 | 3.38 | KM Plot |
| KIRP | rs12780898 | chr10:63377913 | C/G | 0 | 214 | 18.25 | 7.13 | 1.17 | KM Plot |
| KIRP | rs12781009 | chr10:63437986 | C/T | 0 | 214 | 18 | 10.3 | 3.38 | KM Plot |
| KIRP | rs12781756 | chr10:63438614 | A/G | 0 | 214 | 18 | 9 | 3.38 | KM Plot |
| KIRP | rs12782516 | chr10:70640510 | G/A | 8.57E-9 | 213 | 14.85 | 18.77 | 9.77 | KM Plot |
| KIRP | rs12782963 | chr10:102048208 | G/T | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
| KIRP | rs12783453 | chr10:70735459 | T/C | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs12784615 | chr10:63435110 | C/A | 7.18E-5 | 213 | 17.02 | 12.13 | 7.85 | KM Plot |
| KIRP | rs12787407 | chr11:8554152 | G/C | 0.000403 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |